Hyungwon Choi: search on Z-Library

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1

False Discovery Rates and Related Statistical Concepts in Mass Spectrometry-Based Proteomics

Choi, Hyungwon, Nesvizhskii, Alexey I.

Journal:

Journal of Proteome Research

Year:

2008

Language:

english

File:

PDF, 82 KB

english, 2008

2

A Quantitative Chaperone Interaction Network Reveals the Architecture of Cellular Protein Homeostasis Pathways

Taipale, Mikko, Tucker, George, Peng, Jian, Krykbaeva, Irina, Lin, Zhen-Yuan, Larsen, Brett, Choi, Hyungwon, Berger, Bonnie, Gingras, Anne-Claude, Lindquist, Susan

Journal:

Year:

2014

Language:

english

File:

PDF, 7.41 MB

english, 2014

3

Customized Consensus Spectral Library Building for Untargeted Quantitative Metabolomics Analysis with Data Independent Acquisition Mass Spectrometry and MetaboDIA Workflow

Chen, Gengbo, Walmsley, Scott, Cheung, Gemmy C. M., Chen, Liyan, Cheng, Ching-Yu, Beuerman, Roger W., Wong, Tien Yin, Zhou, Lei, Choi, Hyungwon

Journal:

Analytical Chemistry

Year:

2017

Language:

english

File:

PDF, 1.67 MB

english, 2017

4

Label-free quantitative proteomics reveals differentially regulated proteins in the latex of sticky diseased Carica papaya L. plants

Silas P. Rodrigues, José A. Ventura, Clemente Aguilar, Ernesto S. Nakayasu, HyungWon Choi, Tiago J.P. Sobreira, Lilian L. Nohara, Luciana S. Wermelinger, Igor C. Almeida, Russolina B. Zingali, Patrici

Journal:

Journal of Proteomics

Year:

2012

Language:

english

File:

PDF, 480 KB

english, 2012

5

MetTailor: Dynamic Block Summary and Intensity Normalization for Robust Analysis of Mass Spectrometry Data in Metabolomics

Chen, Gengbo, Cui, Liang, Teo, Guoshou, Ong, Choon Nam, Tan, Chuen Seng, Choi, Hyungwon

Journal:

Year:

2015

Language:

english

File:

PDF, 1.92 MB

english, 2015

6

Moving beyond P values: data analysis with estimation graphics

Ho, Joses, Tumkaya, Tayfun, Aryal, Sameer, Choi, Hyungwon, Claridge-Chang, Adam

Journal:

Year:

2019

Language:

english

File:

PDF, 862 KB

english, 2019

7

A Scalable and Secure Group Key Management Method for Secure V2V Communication

Aliev, Hayotjon, Kim, HyungWon, Choi, Sunghyun

Journal:

Year:

2020

File:

PDF, 6.15 MB

2020

8

A Double-Layered Mixture Model for the Joint Analysis of DNA Copy Number and Gene Expression Data

Choi, Hyungwon, Qin, Zhaohui S., Ghosh, Debashis

Journal:

Journal of Computational Biology

Year:

2010

Language:

english

File:

PDF, 500 KB

english, 2010

9

EBprot: Statistical analysis of labeling-based quantitative proteomics data

Koh, Hiromi W. L., Swa, Hannah L. F., Fermin, Damian, Ler, Siok Ghee, Gunaratne, Jayantha, Choi, Hyungwon

Journal:

Year:

2015

Language:

english

File:

PDF, 1.22 MB

english, 2015

10

Plasma fatty acids, oxylipins, and risk of myocardial infarction: the Singapore Chinese Health Study

Sun, Ye, Koh, Hiromi W. L., Choi, Hyungwon, Koh, Woon-Puay, Yuan, Jian-Min, Newman, John W., Su, Jin, Fang, Jinling, Ong, Choon Nam, van Dam, Rob M.

Journal:

The Journal of Lipid Research

Year:

2016

Language:

english

File:

PDF, 887 KB

english, 2016

11

Environmental Effects of Nanoceria on Seed Production of Common bean (Phaseolus vulgaris): A Proteomic Analysis

Majumdar, Sanghamitra, Almeida, Igor C, Arigi, Emma A., Choi, Hyungwon, VerBerkmoes, Nathan C., Trujillo-Reyes, Jesica, Flores-Margez, Juan P., White, Jason C., Peralta-Videa, Jose R, Gardea-Torresdey

Journal:

Environmental Science & Technology

Year:

2015

Language:

english

File:

PDF, 1.51 MB

english, 2015

12

Gene Essentiality Is a Quantitative Property Linked to Cellular Evolvability

Liu, Gaowen, Yong, Mei Yun Jacy, Yurieva, Marina, Srinivasan, Kandhadayar Gopalan, Liu, Jaron, Lim, John Soon Yew, Poidinger, Michael, Wright, Graham Daniel, Zolezzi, Francesca, Choi, Hyungwon, Pavelk

Journal:

Year:

2015

Language:

english

File:

PDF, 2.73 MB

english, 2015

13

Proteomic Analysis of Trypanosoma cruzi Secretome: Characterization of Two Populations of Extracellular Vesicles and Soluble Proteins

Bayer-Santos, Ethel, Aguilar-Bonavides, Clemente, Rodrigues, Silas Pessini, Cordero, Esteban Maurício, Marques, Alexandre Ferreira, Varela-Ramirez, Armando, Choi, Hyungwon, Yoshida, Nobuko, da Silveir

Journal:

Journal of Proteome Research

Year:

2013

Language:

english

File:

PDF, 5.73 MB

english, 2013

14

Wet Cleaning by Using Amphoteric Electrolyzed Water for Mask Cleaning

Ryoo, Kunkul, Jung, Younwon, Choi, Insik, Kim, Hyungwon, Lee, Jaeyong, Choi, Byungsun

Journal:

ECS Transactions

Year:

2019

Language:

english

File:

PDF, 4.56 MB

english, 2019

15

Antibody Binding Alters the Characteristics and Contents of Extracellular Vesicles Released by Histoplasma capsulatum

Matos Baltazar, Ludmila, Nakayasu, Ernesto S., Sobreira, Tiago J. P., Choi, Hyungwon, Casadevall, Arturo, Nimrichter, Leonardo, Nosanchuk, Joshua D., Alspaugh, J. Andrew

Journal:

Year:

2016

Language:

english

File:

PDF, 3.57 MB

english, 2016

16

Symmetric Signal Reconstruction and Frequency-Division Differential Driving for High Rate Touch Screen Sensing

Choi, GyeongSeop, Mohamed, M.G.A., Kim, HyungWon

Journal:

Journal of Display Technology

Year:

2016

Language:

english

File:

PDF, 1.21 MB

english, 2016

17

SAINTexpress: Improvements and additional features in Significance Analysis of INTeractome software

Teo, Guoci, Liu, Guomin, Zhang, Jianping, Nesvizhskii, Alexey I., Gingras, Anne-Claude, Choi, Hyungwon

Journal:

Journal of Proteomics

Year:

2014

Language:

english

File:

PDF, 667 KB

english, 2014

18

Comment

Ghosh, Debashis, Choi, Hyungwon

Journal:

Journal of the American Statistical Association

Year:

2009

Language:

english

File:

PDF, 438 KB

english, 2009

19

Differentiation of Club Cells to Alveolar Epithelial Cells In Vitro

Zheng, Dahai, Soh, Boon-Seng, Yin, Lu, Hu, Guangan, Chen, Qingfeng, Choi, Hyungwon, Han, Jongyoon, Chow, Vincent T. K., Chen, Jianzhu

Journal:

Scientific Reports

Year:

2017

Language:

english

File:

PDF, 1.58 MB

english, 2017

20

PECA: A Novel Statistical Tool for Deconvoluting Time-Dependent Gene Expression Regulation

Teo, Guoshou, Vogel, Christine, Ghosh, Debashis, Kim, Sinae, Choi, Hyungwon

Journal:

Journal of Proteome Research

Year:

2014

Language:

english

File:

PDF, 1.76 MB

english, 2014

21

Plasma Metabonomic Profiling of Diabetic Retinopathy

Chen, Liyan, Cheng, Ching-Yu, Choi, Hyungwon, Ikram, Mohammad Kamran, Sabanayagam, Charumathi, Tan, Gavin SW, Tian, Dechao, Zhang, Liang, Venkatesan, Gopalakrishnan, Tai, E Shyong, Wang, Jie Jin, Mitc

Journal:

Year:

2016

Language:

english

File:

PDF, 537 KB

english, 2016

22

MRMkit: automated data processing for large-scale targeted metabolomics analysis

Teo, Guoshou, Chew, Wee Siong, Burla, Bo, HErr, Deron, Tai, E Shyong, Wenk, Markus Rennie, Torta, Federico T, Choi, Hyungwon

Journal:

Analytical Chemistry

Year:

2020

File:

PDF, 16.96 MB

2020

23

[IEEE 2016 International Conference on Electronics, Information, and Communications (ICEIC) - Danang, Vietnam (2016.1.27-2016.1.30)] 2016 International Conference on Electronics, Information, and Communications (ICEIC) - New FFT design with enhanced scan rate for frequency division concurrent sensing of mutual-capacitance touch screens

Choi, Gyeongseop, Mohamed, M. G. A., Kim, HyungWon

Year:

2016

Language:

english

File:

PDF, 264 KB

english, 2016

24

EBprotV2: A Perseus Plugin for Differential Protein Abundance Analysis of Labeling-based Quantitative Proteomics Data

Koh, Hiromi W.L., Zhang, Yunbin, Vogel, Christine, Choi, Hyungwon

Journal:

Journal of Proteome Research

Year:

2018

Language:

english

File:

PDF, 7.81 MB

english, 2018

25

Polyubiquitin chains linked by lysine residue 48 (K48) selectively target oxidized proteins in vivo

Manohar, Sandhya, Jacob, Samson, Wang, Jade C, Wiechecki, Keira A, Koh, Hiromi W, Simões, Vanessa, Choi, Hyungwon, Vogel, Christine, SILVA, GUSTAVO M.

Journal:

Antioxidants & Redox Signaling

Year:

2019

Language:

english

File:

PDF, 2.72 MB

english, 2019

26

Analysis of hidden terminalâs effect on the performance of vehicular ad-hoc networks

Kumar, Saurabh, Choi, Sunghyun, Kim, HyungWon

Journal:

EURASIP Journal on Wireless Communications and Networking

Year:

2019

Language:

english

File:

PDF, 2.31 MB

english, 2019

27

When One and One Gives More than Two: Challenges and Opportunities of Integrative Omics

Choi, Hyungwon, Pavelka, Norman

Journal:

Frontiers in Genetics

Year:

2012

Language:

english

File:

PDF, 544 KB

english, 2012

28

Erratum: Erratum: Phosphoprotein network analysis of white adipose tissues unveils deregulated pathways in response to high-fat diet

Alli Shaik, Asfa, Qiu, Beiying, Wee, Sheena, Choi, Hyungwon, Gunaratne, Jayantha, Tergaonkar, Vinay

Journal:

Scientific Reports

Year:

2016

Language:

english

File:

PDF, 107 KB

english, 2016

29

Prestroke Proteomic Changes in Cerebral Microvessels in Stroke-Prone, Transgenic[hCETP]-Hyperlipidemic, Dahl Salt-Sensitive Hypertensive Rats

Bergerat, Agnes, Decano, Julius, Wu, Chang-Jiun, Choi, Hyungwon, Nesvizhskii, Alexey I, Moran, Ann Marie, Ruiz-Opazo, Nelson, Steffen, Martin, Herrera, Victoria L M

Journal:

Molecular Medicine

Year:

2011

Language:

english

File:

PDF, 2.62 MB

english, 2011

30

Information loss from censoring in rank-based procedures

Johan Lim, Sungim Lee, Hyungwon Choi

Journal:

Statistics & Probability Letters

Year:

2006

Language:

english

File:

PDF, 173 KB

english, 2006

31

[ACM Press SIGGRAPH Asia 2013 Posters - Hong Kong, Hong Kong (2013.11.19-2013.11.22)] SIGGRAPH Asia 2013 Posters on - SA '13 - Applications of projection based interactive user interface

Park, Jun-Cheol, Jang, Yunhun, Choi, Hyungwon, Seong, Sihyeon, Kang, Sunghun, Kim, Dae-Shik

Year:

2013

Language:

english

File:

PDF, 19.63 MB

english, 2013

32

SAINTq: scoring protein-protein interactions in affinity purification - mass spectrometry experiments with fragment or peptide intensity data

Teo, Guoci, Koh, Hiromi, Fermin, Damian, Lambert, Jean-Philippe, Knight, James D.R., Gingras, Anne-Claude, Choi, Hyungwon

Journal:

Year:

2016

Language:

english

File:

PDF, 270 KB

english, 2016

33

Semisupervised Model-Based Validation of Peptide Identifications in Mass Spectrometry-Based Proteomics

Choi, Hyungwon, Nesvizhskii, Alexey I.

Journal:

Journal of Proteome Research

Year:

2008

Language:

english

File:

PDF, 790 KB

english, 2008

34

mapDIA: Preprocessing and statistical analysis of quantitative proteomics data from data independent acquisition mass spectrometry

Teo, Guoshou, Kim, Sinae, Tsou, Chih-Chiang, Collins, Ben, Gingras, Anne-Claude, Nesvizhskii, Alexey I., Choi, Hyungwon

Journal:

Journal of Proteomics

Year:

2015

Language:

english

File:

PDF, 1.97 MB

english, 2015

35

Integration of large-scale multi-omic datasets: A protein-centric view

Rendleman, Justin, Choi, Hyungwon, Vogel, Christine

Journal:

Current Opinion in Systems Biology

Year:

2018

Language:

english

File:

PDF, 1.76 MB

english, 2018

36

MetaboKit: a comprehensive data extraction tool for untargeted metabolomics

Narayanaswamy, Pradeep, Teo, Guoshou, Ow, Jin Rong, Lau, Adam, Kaldis, Philipp, Tate, Stephen, Choi, Hyungwon

Journal:

Molecular Omics

Year:

2020

File:

PDF, 5.46 MB

2020

37

Plasma sphingolipids and risk of cardiovascular diseases: a large-scale lipidomic analysis

Seah, Jowy Yi Hoong, Chew, Wee Siong, Torta, Federico, Khoo, Chin Meng, Wenk, Markus R., Herr, Deron R., Choi, Hyungwon, Tai, E. Shyong, van Dam, Rob M.

Journal:

Year:

2020

File:

PDF, 1.03 MB

2020

38

Adjuvant-induced human monocyte secretome profiles reveal adjuvant- and age-specific protein signatures

Oh, Djin-Ye, Dowling, David J., Ahmed, Saima, Choi, Hyungwon, Brightman, Spencer, Bergelson, Ilana, Berger, Sebastian Tobias, Sauld, John F., Pettengill, Matthew, Kho, Alvin T., Pollack, Henry J., Ste

Journal:

Molecular & Cellular Proteomics

Year:

2016

File:

PDF, 7.77 MB

2016

39

Enhanced stability of spatially confined copper nanoparticles in an ordered mesoporous alumina for dimethyl ether synthesis from syngas

Ham, Hyungwon, Kim, Jihyeon, Cho, Sung June, Choi, Joon-Hwan, Moon, Dong Ju, Bae, Jong Wook

Journal:

Year:

2016

Language:

english

File:

PDF, 4.56 MB

english, 2016

40

Phosphoprotein network analysis of white adipose tissues unveils deregulated pathways in response to high-fat diet

Asfa, Alli Shaik, Qiu, Beiying, Wee, Sheena, Choi, Hyungwon, Gunaratne, Jayantha, Tergaonkar, Vinay

Journal:

Scientific Reports

Year:

2016

Language:

english

File:

PDF, 2.10 MB

english, 2016

41

[IEEE 2017 IEEE International Symposium on Information Theory (ISIT) - Aachen, Germany (2017.6.25-2017.6.30)] 2017 IEEE International Symposium on Information Theory (ISIT) - Adiabatic Persistent Contrastive Divergence learning

Jang, Hyeryung, Choi, Hyungwon, Yi, Yung, Shin, Jinwoo

Year:

2017

Language:

english

File:

PDF, 171 KB

english, 2017

42

Analysis of protein complexes through model-based biclustering of label-free quantitative AP-MS data

Choi, Hyungwon, Kim, Sinae, Gingras, Anne-Claude, Nesvizhskii, Alexey I

Journal:

Molecular Systems Biology

Year:

2010

Language:

english

File:

PDF, 1.62 MB

english, 2010

43

Identification of Novel Host Interactors of Effectors Secreted by Salmonella and Citrobacter

Sontag, Ryan L., Nakayasu, Ernesto S., Brown, Roslyn N., Niemann, George S., Sydor, Michael A., Sanchez, Octavio, Ansong, Charles, Lu, Shao-Yeh, Choi, Hyungwon, Valleau, Dylan, Weitz, Karl K., Savchen

Journal:

Year:

2016

Language:

english

File:

PDF, 1.18 MB

english, 2016

44

Cerebral transcriptome analysis reveals age-dependent progression of neuroinflammation in P301S mutant tau transgenic male mice

Kim, Joonki, Selvaraji, Sharmelee, Kang, Sung Wook, Lee, Wei Thye, Chen, Christopher Li-Hsian, Choi, Hyungwon, Koo, Edward H., Jo, Dong-Gyu, Leong Lim, Kah, Lim, Yun-An, Arumugam, Thiruma V.

Journal:

Brain, Behavior, and Immunity

Year:

2019

File:

PDF, 4.02 MB

2019

45

Plasma Protein and MicroRNA Biomarkers of Insulin Resistance: A Network-Based Integrative -Omics Analysis

Choi, Hyungwon, Koh, Hiromi W. L., Zhou, Lihan, Cheng, He, Loh, Tze Ping, Parvaresh Rizi, Ehsan, Toh, Sue Anne, Ronnett, Gabriele V., Huang, Bevan E., Khoo, Chin Meng

Journal:

Frontiers in Physiology

Year:

2019

Language:

english

File:

PDF, 4.66 MB

english, 2019

46

iOmicsPASS: network-based integration of multiomics data for predictive subnetwork discovery

Koh, Hiromi W. L., Fermin, Damian, Vogel, Christine, Choi, Kwok Pui, Ewing, Rob M., Choi, Hyungwon

Journal:

npj Systems Biology and Applications

Year:

2019

Language:

english

File:

PDF, 3.92 MB

english, 2019

47

Computational detection of protein complexes in AP-MS experiments

Journal:

Year:

2012

Language:

english

File:

PDF, 614 KB

english, 2012

48

BCL-xL/BCL2L1 is a critical anti-apoptotic protein that promotes the survival of differentiating pancreatic cells from human pluripotent stem cells

Loo, Larry Sai Weng, Soetedjo, Andreas Alvin Purnomo, Lau, Hwee Hui, Ng, Natasha Hui Jin, Ghosh, Soumita, Nguyen, Linh, Krishnan, Vidhya Gomathi, Choi, Hyungwon, Roca, Xavier, Hoon, Shawn, Teo, Adrian

Journal:

Cell Death and Disease

Year:

2020

File:

PDF, 2.21 MB

2020

49

Concentration-dependent protein loading of extracellular vesicles released by Histoplasma capsulatum after antibody treatment and its modulatory action upon macrophages

Baltazar, Ludmila Matos, Zamith-Miranda, Daniel, Burnet, Meagan C., Choi, Hyungwon, Nimrichter, Leonardo, Nakayasu, Ernesto S., Nosanchuk, Joshua D.

Journal:

Scientific Reports

Year:

2018

Language:

english

File:

PDF, 1.72 MB

english, 2018

50

Prestroke Proteomic Changes in Cerebral Microvessels in Stroke-Prone, Transgenic[hCETP]-Hyperlipidemic, Dahl Salt-Sensitive Hypertensive Rats

Bergerat, Agnes, Decano, Julius, Wu, Chang-Jiun, Choi, Hyungwon, Nesvizhskii, Alexey I, Moran, Ann Marie, Ruiz-Opazo, Nelson, Steffen, Martin, Herrera, Victoria L M

Journal:

Molecular Medicine

Year:

2011

File:

PDF, 2.62 MB

2011

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